Weekly Brief, 20 July 2020

ELIXIR Featured in the Digital Workforce OECD Report

ELIXIR was highlighted as one of the 'networks at the forefront of the research response to COVID-19' in the Foreword of this recent report from the Organisation for Economic Development and Cooperation (OECD).

Celia van Gelder (ELIXIR Netherland) and Corinne Martin (ELIXIR Hub) contributed directly to the report, entitled 'Building digital workforce capacity and skills for data-intensive science'. And last October, Celia presented ELIXIRs approach to tackle the digital skills gap at the OECD international expert workshop

Read the report

Tip of the week

Did you know you can use our ELIXIR coordinated backgrounds for your Zoom calls?
Orange or Blue?

Download the backgrounds

Updates from Nodes

ELIXIR-FR is working on training materials for Jupyter Notebook

Together with Pitagora Network, the Frech Node has published the first notebook on COVID-19, which was developed during the COVID-19 Virtual Biohackathon.
Read the first notebook
Discover how you can contribute

What is Jupyter Notebook?

'The Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include data cleaning and transformation, numerical simulation, statistical modelling, data visualization, machine learning, and much more.'

ELIXIR Spain | GENyO launches new COVID-19 Platform DatAC (Data against COVID-19)

Created by GENyO, a member of TransBioNet

The new platform integrates COVID-19 data with environmental and meteorological factors for each Spanish region. DatAC not only centralises and integrates data, but also implements different analysis and visual exploration functionalities to find relevant patterns.
It has been developed by the GENyO Bioinformatics Unit (part of TransBioNet), lead by Pedro Carmona Sez and the Statistics Department of the University of Granada.

Go to the DatAC platform

Updates from Platforms

The Tools Platform wants your feedback on the Software Management Plan

On 9 July, the Tools Platform organised a webinar to present and gather feedback on their Software Management Plan template, which is used across different ELIXIR projects.
The recording is now available on our Youtube Channel, and given the success of the meeting, we are still encouraging feedback until the 8 September 2020.

Submit your feedback
Watch the webinar

Virtual Coffee Room for the Training Platform FAQs

The ELIXIR Training Platform is now using the Virtual Coffee Room as a platform for its FAQs. Find the answer to questions such as, 'If there is a training event happening in my institute, can I register it in TeSS?'
Go to the Virtual Coffee Room

ECCB 2020 Tutorial on Machine Learning and Omics data

Opportunities for advancing biomedical data analysis in Galaxy

The ELIXIR Training Platform, together with GOBLET and Galaxy, will be running this tutorial at the ECCB 2020. It is aimed at Life Sciences graduate students and researchers who are familiar with different omics data analysis and interested in applying machine learning to analyse omics data using Galaxy.
Go to the ECCB Website for more details

Updates from Communities

Recommended Read: CINECA Blog post with Gary Saunders (ELIXIR Hub)

ELIXIR CINECA and the ELIXIR Federated Human Data Community

Gary Saunders contributed to this CINECA Blog post to introduce the Federated Human Data Community and its connection with the CINECA Project. He also explored the prospects of human data sharing, moving towards a mature supercomputing framework in Europe and envisioning a future not only at a European scale but global.
Read the CINECA blog post

Upcoming ELIXIR events and webinars

ELIXIR Training Courses and Webinars

The ELIXIR TeSS portal has a variety of interesting events and courses organised by the ELIXIR Nodes. A link off to the TeSS portal

ELIXIR Events and Conferences

19th European Conference on Computational Biology

31 August8 September 2020 | Online

Registration for the virtual ECCB2020 is now open!

EuroScience Open Forum

26 September 2020 | Trieste, Italy and Online

ELIXIR will present 'Open Data InfrastructureA Driver for Innovation Ecosystem' during the Science to business session (Track: Innovation Ecosystems).

ELIXIR BioHakacthon Europe

913 November 2020 | Barcelona, Spain

Registration is now open!

Job vacancies

All vacancies are also published on the ELIXIR website (also including those from industry). If you need our help communicating your new open positions, you can submit a job advertisement and it will automatically appear on our newsletters. Go to our vacancy page to submit a job

Data Management Usability Officer

VIB

Postdoctoral researcher in ML applied to simulations in biomedicine at the Computational Biology Group

Barcelona Supercomputing Center (BSC-CNS)

Junior Research Engineer for simulations in biomedicine at the Computational Biology Group

Barcelona Supercomputing Center (BSC-CNS)

Postdoc computational modeling kidney transport

Maastricht University

Business Development Officer

Institut Franais de Bioinformatique