Weekly Brief, 19 August 2019

Hub updates

ELIXIR has published a report presenting the different ways in which ELIXIR Nodes support industry, which includes success stories highlighting industry-academia collaboration across ELIXIR. If you would like advice on how to set up connections with industry in your area please contact our ELIXIR Industry Officer Katharina Lauer.

The EC has opened a call for expression of interest in joining an eHealth stakeholder group to provide high-level advice and expertise. It may be of interest to those groups in ELIXIR working at the interface of human research data and eHealth.

Next Monday (26 August) is a public holiday in the UK, so we will be sending the weekly brief email on Tuesday 27 August. If you are contacting members of the Hub please be aware that you may not get a response until Tuesday.

Updates from Platforms

A new publication on the bio.tools registry was released last week in Genome Biology. Read on to find out about the successes of the project, and about their future plans.

Updates from Nodes

The "CyTargetLinker app update: A flexible solution for network extension in Cytoscape" paper has been published in the ELIXIR F1000Research channel. With a new automation feature the CyTargetLinker now supports programmatic use with external tools (e.g. R, Jupyter, Python etc.) and in Cytoscape.

Job board

All vacancies are also published on the ELIXIR website vacancies section(also including vacancies from industry). Submit vacancies from your Node or industry partners.

Life Science Informatics Manager
University of Manchester

Cloud software developer ELIXIR
VIB

Postdoctoral Researcher in Computer Science with a Focus on Virtual Physiological Human (aka Digital Patient or Digital Twin)
University of West Bohemia

Bioinformatican with focus on Data Stewardship
ELIXIR-SE / Uppsala University

Senior Scientist Computational Biotechnology
Institute of Computational Biotechnology, TU Graz

Upcoming events

The ELIXIR TeSS portal has a variety of interesting events and courses organised by the ELIXIR Nodes.

ELIXIR events

Statistical tests and statistical learning for omics data
11 - 12 September 2019 | University of Luxembourg, Luxembourg

Current advances in text mining
25 - 26 September 2019 | University of Luxembourg, Luxembourg

ELIXIR Innovation and SME Forum: Distributed data analysis - the {health} data train
10 - 11 October 2019 | Utrecht, Netherlands

Algorithms for Genomics
14 - 18 October 2019 | Delft, Netherlands

Final OpenRiskNet Workshop: Creating powerful workflows combining data and software services demonstrated on risk assessment case studies [Industry workshop]
23 - 24 October 2019 | Amsterdam, Netherlands

Constraint based modelling
25 - 29 November 2019 | Leiden, Netherlands

Modelling and optimisation for bioinformatics and systems biology
9 - 13 December 2019 | Wageningen, Netherlands

EMBO Practical Course: Integrated multi-omic analysis of microbial communities
16 - 23 March 2020 | Luxembourg City, Luxembourg