Galaxy-ELIXIR webinars series: Advanced Features

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Galaxy project logoGalaxy is supported by a large and active community distributed across the globe, which leads to rapid developments in every release. However, many of this features remain unknown by most of the users.

With this series of four webinars chaired by Hans-Rudolf Hotz, the global Galaxy community will present such advanced features, touching upon workflows, data processing and management, interoperability and interactive tools, among others. (This is independent of the Galaxy COVID-19 Webinar Series). 

These events will run between 3 and 24 March 2021.

Programme

3 March: Advanced Galaxy workflow features

3 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)

The first webinar covered recent Advanced Galaxy workflow features, from parameter sweeping to automatic reports:

  • Workflow-parameters
  • Invocations
  • Workflow-reports

Speakers:

  • Marius van den Beek
  • Aysam Guerler
  • Hans-Rudolf Holz

Slide deck 

10 March: Processing thousands of datasets simultaneously

10 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)

Processing thousands of datasets simultaneously: From SRA/ENA import and metadata annotation to parallel processing

  • Collections
  • Advanced collection features (tags, rule-builder, etc.)

Speakers:

  • Wolfgang Maier
  • Anton Nekrutenko

Slide deck 

17 March: Galaxy bridge to Jupyter notebooks and RStudio

17 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)

Jupyter Notebooks and RStudio in combination with Galaxy workflows

  • Interactive tools and Galaxy communication with other projects

Speakers:

  • Daniel Blankenberg
  • Bérénice Batut
  • Helena Rasche

Slide deck 

24 March: Speed up your data analysis with Galaxy: Features no one knows about

24 March 2021, 17.00-18.00 CET (starts at 16.00 GMT, 11.00 EST, 8.00 PST)

Speed up your data analysis with Galaxy: Features no one knows about

  • User-preference options
  • Data privacy, collaboration, and sharing
  • Visualizations and graphing
  • Edit a dataset directly
  • Rerun a tool without resetting all parameters

Speakers:

  • Jennifer Hillman-Jackson
  • Anika Erxleben

Slide deck 

Acknowledgement

The Galaxy-ELIXIR community,  the global Galaxy community, and the Galaxy project.

Galaxy Project    European Galaxy Project    Australian Galaxy Project    bioconda   XSEDE    TACC    de.NBI   ELIXIR   PSC   Indiana University    Galaxy Training Network    Bio Platforms Australia    Australian Research Data Commons     VIB   ELIXIR Belgium    Vlaams Supercomputer Center  EOSC-Life   FMI   Datamonkey  IFB